Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.84□□□□□ -0.19
Trim43bP86448 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim43bP86448 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43bP86448 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim43bP86448 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim43bP86448 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43bP86448 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Gm7730-201ENSMUST00000212486 454 ntBASIC13.84□□□□□ -0.19
Trim43bP86448 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.84□□□□□ -0.19
Trim43bP86448 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.84□□□□□ -0.19
Trim43bP86448 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Mir125a-201ENSMUST00000083545 68 ntBASIC13.84□□□□□ -0.19
Trim43bP86448 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43bP86448 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43bP86448 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43bP86448 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.83□□□□□ -0.19
Trim43bP86448 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.83□□□□□ -0.2
Trim43bP86448 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm24694-201ENSMUST00000180054 110 ntBASIC13.83□□□□□ -0.2
Trim43bP86448 Gm27663-201ENSMUST00000184839 110 ntBASIC13.83□□□□□ -0.2
Trim43bP86448 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.83□□□□□ -0.2
Trim43bP86448 Gm44719-201ENSMUST00000206404 149 ntBASIC13.83□□□□□ -0.2
Trim43bP86448 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim43bP86448 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim43bP86448 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43bP86448 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43bP86448 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43bP86448 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.82□□□□□ -0.2
Trim43bP86448 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trim43bP86448 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.82□□□□□ -0.2
Trim43bP86448 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.82□□□□□ -0.2
Trim43bP86448 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim43bP86448 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Syt7-204ENSMUST00000223586 1344 ntBASIC13.82□□□□□ -0.2
Trim43bP86448 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.82□□□□□ -0.2
Trim43bP86448 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim43bP86448 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43bP86448 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms