Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CiitaP79621 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CiitaP79621 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CiitaP79621 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CiitaP79621 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CiitaP79621 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.52□□□□□ -0.08
CiitaP79621 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CiitaP79621 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CiitaP79621 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CiitaP79621 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CiitaP79621 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
CiitaP79621 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.52□□□□□ -0.08
CiitaP79621 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.52□□□□□ -0.09
CiitaP79621 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Gm11618-201ENSMUST00000117946 267 ntBASIC14.52□□□□□ -0.09
CiitaP79621 Gm12384-201ENSMUST00000119228 919 ntBASIC14.52□□□□□ -0.09
CiitaP79621 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CiitaP79621 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Gm37922-201ENSMUST00000195596 455 ntBASIC14.52□□□□□ -0.09
CiitaP79621 Gm43818-201ENSMUST00000200605 466 ntBASIC14.52□□□□□ -0.09
CiitaP79621 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.52□□□□□ -0.09
CiitaP79621 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.52□□□□□ -0.09
CiitaP79621 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.52□□□□□ -0.09
CiitaP79621 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CiitaP79621 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CiitaP79621 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CiitaP79621 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CiitaP79621 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.51□□□□□ -0.09
CiitaP79621 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.51□□□□□ -0.09
CiitaP79621 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.51□□□□□ -0.09
CiitaP79621 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.51□□□□□ -0.09
CiitaP79621 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.51□□□□□ -0.09
CiitaP79621 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Gm23931-201ENSMUST00000103842 109 ntBASIC14.51□□□□□ -0.09
CiitaP79621 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.51□□□□□ -0.09
CiitaP79621 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.51□□□□□ -0.09
CiitaP79621 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.51□□□□□ -0.09
CiitaP79621 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CiitaP79621 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CiitaP79621 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CiitaP79621 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Gm13123-201ENSMUST00000122173 492 ntBASIC14.5□□□□□ -0.09
CiitaP79621 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.5□□□□□ -0.09
CiitaP79621 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Gm27682-201ENSMUST00000183930 110 ntBASIC14.5□□□□□ -0.09
CiitaP79621 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.5□□□□□ -0.09
CiitaP79621 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
CiitaP79621 Gm40466-201ENSMUST00000212174 422 ntBASIC14.5□□□□□ -0.09
CiitaP79621 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Gm16372-201ENSMUST00000073088 450 ntBASIC14.5□□□□□ -0.09
CiitaP79621 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CiitaP79621 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CiitaP79621 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms