Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC21.52■■□□□ 1.04
Cux2P70298 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cux2P70298 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Gm29615-201ENSMUST00000185371 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28224-201ENSMUST00000186078 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm29001-201ENSMUST00000186177 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28292-201ENSMUST00000186593 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28101-201ENSMUST00000187608 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm29076-201ENSMUST00000187689 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28302-201ENSMUST00000187931 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28646-201ENSMUST00000188220 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28205-201ENSMUST00000189177 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm29032-201ENSMUST00000189797 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm28695-201ENSMUST00000190300 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Gm37448-201ENSMUST00000192795 697 ntBASIC21.52■■□□□ 1.04
Cux2P70298 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cux2P70298 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC21.52■■□□□ 1.04
Cux2P70298 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cux2P70298 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Cux2P70298 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
Cux2P70298 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cux2P70298 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
Cux2P70298 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cux2P70298 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cux2P70298 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Mmp14-206ENSMUST00000225641 3238 ntBASIC21.51■■□□□ 1.03
Cux2P70298 Gm6992-201ENSMUST00000217973 1607 ntBASIC21.51■■□□□ 1.03
Cux2P70298 Gm11941-201ENSMUST00000119904 610 ntBASIC21.51■■□□□ 1.03
Cux2P70298 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC21.51■■□□□ 1.03
Cux2P70298 Gm38210-201ENSMUST00000191944 809 ntBASIC21.51■■□□□ 1.03
Cux2P70298 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC21.51■■□□□ 1.03
Cux2P70298 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cux2P70298 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cux2P70298 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cux2P70298 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cux2P70298 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cux2P70298 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Cux2P70298 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC21.5■■□□□ 1.03
Cux2P70298 Gm37905-201ENSMUST00000195310 341 ntBASIC21.5■■□□□ 1.03
Cux2P70298 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC21.5■■□□□ 1.03
Cux2P70298 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC21.5■■□□□ 1.03
Cux2P70298 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cux2P70298 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cux2P70298 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC21.49■■□□□ 1.03
Cux2P70298 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC21.49■■□□□ 1.03
Cux2P70298 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC21.49■■□□□ 1.03
Cux2P70298 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC21.49■■□□□ 1.03
Cux2P70298 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC21.49■■□□□ 1.03
Cux2P70298 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC21.49■■□□□ 1.03
Cux2P70298 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Gm39404-201ENSMUST00000216350 313 ntBASIC21.49■■□□□ 1.03
Cux2P70298 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC21.49■■□□□ 1.03
Cux2P70298 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cux2P70298 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cux2P70298 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cux2P70298 Gm16425-201ENSMUST00000118143 3130 ntBASIC21.49■■□□□ 1.03
Cux2P70298 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Cux2P70298 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cux2P70298 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC21.48■■□□□ 1.03
Cux2P70298 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cux2P70298 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cux2P70298 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Cux2P70298 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cux2P70298 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC21.48■■□□□ 1.03
Cux2P70298 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms