Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm15678-201ENSMUST00000117573 960 ntBASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.81□□□□□ -0.04
Hmgb1P63158 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb1P63158 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.81□□□□□ -0.04
Hmgb1P63158 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb1P63158 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.8□□□□□ -0.04
Hmgb1P63158 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.8□□□□□ -0.04
Hmgb1P63158 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.8□□□□□ -0.04
Hmgb1P63158 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb1P63158 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb1P63158 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgb1P63158 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgb1P63158 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgb1P63158 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgb1P63158 Gm17795-201ENSMUST00000214505 757 ntBASIC14.79□□□□□ -0.04
Hmgb1P63158 Gm17330-201ENSMUST00000221047 165 ntBASIC14.79□□□□□ -0.04
Hmgb1P63158 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.79□□□□□ -0.04
Hmgb1P63158 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.79□□□□□ -0.04
Hmgb1P63158 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.79□□□□□ -0.04
Hmgb1P63158 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgb1P63158 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms