Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.16□□□□□ -0.46
Vbp1P61759 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Gm6659-201ENSMUST00000174752 547 ntBASIC12.16□□□□□ -0.46
Vbp1P61759 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.16□□□□□ -0.46
Vbp1P61759 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Vbp1P61759 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Vbp1P61759 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vbp1P61759 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vbp1P61759 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.15□□□□□ -0.46
Vbp1P61759 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vbp1P61759 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vbp1P61759 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Gm15173-201ENSMUST00000122049 433 ntBASIC12.15□□□□□ -0.46
Vbp1P61759 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.15□□□□□ -0.46
Vbp1P61759 Gm6550-201ENSMUST00000187574 993 ntBASIC12.15□□□□□ -0.46
Vbp1P61759 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.15□□□□□ -0.46
Vbp1P61759 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.15□□□□□ -0.46
Vbp1P61759 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vbp1P61759 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vbp1P61759 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Vbp1P61759 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.15□□□□□ -0.47
Vbp1P61759 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vbp1P61759 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Vbp1P61759 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vbp1P61759 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Vbp1P61759 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vbp1P61759 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.14□□□□□ -0.47
Vbp1P61759 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.14□□□□□ -0.47
Vbp1P61759 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.14□□□□□ -0.47
Vbp1P61759 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.14□□□□□ -0.47
Vbp1P61759 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.14□□□□□ -0.47
Vbp1P61759 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vbp1P61759 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vbp1P61759 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vbp1P61759 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms