Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Shmt1P50431 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.2□□□□□ -0.14
Shmt1P50431 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.2□□□□□ -0.14
Shmt1P50431 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shmt1P50431 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt1P50431 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.19□□□□□ -0.14
Shmt1P50431 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shmt1P50431 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm11814-201ENSMUST00000119515 929 ntBASIC14.19□□□□□ -0.14
Shmt1P50431 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.19□□□□□ -0.14
Shmt1P50431 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.19□□□□□ -0.14
Shmt1P50431 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt1P50431 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt1P50431 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Shmt1P50431 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Gm12390-201ENSMUST00000117897 397 ntBASIC14.18□□□□□ -0.14
Shmt1P50431 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Gm27486-201ENSMUST00000184923 80 ntBASIC14.18□□□□□ -0.14
Shmt1P50431 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Gm6091-201ENSMUST00000098307 165 ntBASIC14.18□□□□□ -0.14
Shmt1P50431 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt1P50431 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shmt1P50431 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.17□□□□□ -0.14
Shmt1P50431 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms