Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.12□□□□□ -0.63
Nkx2-1P50220 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm18057-201ENSMUST00000208220 503 ntBASIC11.12□□□□□ -0.63
Nkx2-1P50220 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.12□□□□□ -0.63
Nkx2-1P50220 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.12□□□□□ -0.63
Nkx2-1P50220 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx2-1P50220 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.11□□□□□ -0.63
Nkx2-1P50220 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.11□□□□□ -0.63
Nkx2-1P50220 Mir874-201ENSMUST00000104769 76 ntBASIC11.11□□□□□ -0.63
Nkx2-1P50220 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gm37714-201ENSMUST00000194742 342 ntBASIC11.11□□□□□ -0.63
Nkx2-1P50220 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms