Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
GdnfP48540 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GdnfP48540 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
GdnfP48540 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Gm5566-201ENSMUST00000116118 459 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Gm8410-201ENSMUST00000117225 605 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
GdnfP48540 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Gm22175-201ENSMUST00000175007 78 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Gm45453-201ENSMUST00000211758 853 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 BC001981-202ENSMUST00000191393 1545 ntBASIC11.79□□□□□ -0.52
GdnfP48540 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
GdnfP48540 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
GdnfP48540 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
GdnfP48540 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.79□□□□□ -0.52
GdnfP48540 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
GdnfP48540 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.78□□□□□ -0.52
GdnfP48540 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Gm12882-201ENSMUST00000121696 517 ntBASIC11.78□□□□□ -0.52
GdnfP48540 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
GdnfP48540 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
GdnfP48540 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.78□□□□□ -0.52
GdnfP48540 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.78□□□□□ -0.52
GdnfP48540 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
GdnfP48540 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
GdnfP48540 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.77□□□□□ -0.52
GdnfP48540 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
GdnfP48540 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
GdnfP48540 Gm12428-201ENSMUST00000119844 727 ntBASIC11.77□□□□□ -0.53
GdnfP48540 Gm27618-201ENSMUST00000183671 60 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms