Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf4P43488 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm25948-201ENSMUST00000175334 112 ntBASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm27430-201ENSMUST00000184585 107 ntBASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.98□□□□□ -0.33
Tnfsf4P43488 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm44333-201ENSMUST00000197168 107 ntBASIC12.98□□□□□ -0.33
Tnfsf4P43488 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tnfsf4P43488 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.97□□□□□ -0.33
Tnfsf4P43488 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.97□□□□□ -0.33
Tnfsf4P43488 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tnfsf4P43488 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf4P43488 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms