Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm12997-201ENSMUST00000120207 640 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Mir7070-201ENSMUST00000183657 86 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Gm18753-201ENSMUST00000201000 566 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Gm18584-201ENSMUST00000203098 964 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Morn2-202ENSMUST00000227729 656 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.71□□□□□ -0.37
Cdx2P43241 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdx2P43241 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdx2P43241 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.71□□□□□ -0.38
Cdx2P43241 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Cdx2P43241 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.71□□□□□ -0.38
Cdx2P43241 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.71□□□□□ -0.38
Cdx2P43241 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cdx2P43241 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdx2P43241 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.7□□□□□ -0.38
Cdx2P43241 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdx2P43241 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.7□□□□□ -0.38
Cdx2P43241 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm5781-201ENSMUST00000219792 443 ntBASIC12.7□□□□□ -0.38
Cdx2P43241 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdx2P43241 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Cdx2P43241 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdx2P43241 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.7□□□□□ -0.38
Cdx2P43241 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdx2P43241 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.69□□□□□ -0.38
Cdx2P43241 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Cdx2P43241 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdx2P43241 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdx2P43241 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Gm24548-201ENSMUST00000158650 108 ntBASIC12.69□□□□□ -0.38
Cdx2P43241 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cdx2P43241 Gm28693-202ENSMUST00000190758 331 ntBASIC12.69□□□□□ -0.38
Cdx2P43241 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Cdx2P43241 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdx2P43241 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cdx2P43241 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms