Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HttP42859 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
HttP42859 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HttP42859 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HttP42859 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HttP42859 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HttP42859 Gm4482-201ENSMUST00000200876 742 ntBASIC13.9□□□□□ -0.18
HttP42859 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HttP42859 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Gm13937-201ENSMUST00000121000 988 ntBASIC13.9□□□□□ -0.18
HttP42859 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.9□□□□□ -0.18
HttP42859 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.9□□□□□ -0.18
HttP42859 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.9□□□□□ -0.18
HttP42859 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.9□□□□□ -0.18
HttP42859 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.9□□□□□ -0.18
HttP42859 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HttP42859 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.9□□□□□ -0.18
HttP42859 Mir6998-201ENSMUST00000183343 64 ntBASIC13.9□□□□□ -0.18
HttP42859 Mir6923-201ENSMUST00000184592 72 ntBASIC13.9□□□□□ -0.18
HttP42859 Gm43520-201ENSMUST00000197996 164 ntBASIC13.9□□□□□ -0.18
HttP42859 Gm19994-201ENSMUST00000217086 586 ntBASIC13.9□□□□□ -0.18
HttP42859 Gm3619-201ENSMUST00000219947 775 ntBASIC13.9□□□□□ -0.18
HttP42859 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.9□□□□□ -0.18
HttP42859 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HttP42859 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
HttP42859 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HttP42859 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.89□□□□□ -0.19
HttP42859 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Gm11451-201ENSMUST00000118946 630 ntBASIC13.89□□□□□ -0.19
HttP42859 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Gm27627-201ENSMUST00000183644 150 ntBASIC13.89□□□□□ -0.19
HttP42859 Gm18038-201ENSMUST00000197900 485 ntBASIC13.89□□□□□ -0.19
HttP42859 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.89□□□□□ -0.19
HttP42859 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HttP42859 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.89□□□□□ -0.19
HttP42859 Gm28388-201ENSMUST00000186262 437 ntBASIC13.89□□□□□ -0.19
HttP42859 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.89□□□□□ -0.19
HttP42859 Gm44329-201ENSMUST00000197469 112 ntBASIC13.89□□□□□ -0.19
HttP42859 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
HttP42859 Gm9996-201ENSMUST00000070359 913 ntBASIC13.89□□□□□ -0.19
HttP42859 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HttP42859 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HttP42859 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.89□□□□□ -0.19
HttP42859 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HttP42859 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.88□□□□□ -0.19
HttP42859 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Gm43778-201ENSMUST00000199438 199 ntBASIC13.88□□□□□ -0.19
HttP42859 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.88□□□□□ -0.19
HttP42859 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HttP42859 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HttP42859 Mt1-202ENSMUST00000211807 1085 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms