Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.39□□□□□ -0.27
LdlrP35951 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LdlrP35951 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Gm5566-201ENSMUST00000116118 459 ntBASIC13.39□□□□□ -0.27
LdlrP35951 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
LdlrP35951 Gm9719-201ENSMUST00000162765 543 ntBASIC13.39□□□□□ -0.27
LdlrP35951 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.39□□□□□ -0.27
LdlrP35951 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LdlrP35951 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LdlrP35951 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.39□□□□□ -0.27
LdlrP35951 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LdlrP35951 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LdlrP35951 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.38□□□□□ -0.27
LdlrP35951 Gm6916-202ENSMUST00000205523 195 ntBASIC13.38□□□□□ -0.27
LdlrP35951 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LdlrP35951 Dupd1-202ENSMUST00000224735 548 ntBASIC13.38□□□□□ -0.27
LdlrP35951 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.38□□□□□ -0.27
LdlrP35951 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LdlrP35951 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LdlrP35951 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LdlrP35951 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LdlrP35951 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LdlrP35951 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.38□□□□□ -0.27
LdlrP35951 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LdlrP35951 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.37□□□□□ -0.27
LdlrP35951 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.37□□□□□ -0.27
LdlrP35951 Gm29667-201ENSMUST00000190817 490 ntBASIC13.37□□□□□ -0.27
LdlrP35951 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LdlrP35951 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LdlrP35951 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms