Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfc1P35601 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc1P35601 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.14□□□□□ -0.15
Rfc1P35601 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.14□□□□□ -0.15
Rfc1P35601 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.14□□□□□ -0.15
Rfc1P35601 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.14□□□□□ -0.15
Rfc1P35601 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rfc1P35601 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rfc1P35601 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfc1P35601 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc1P35601 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc1P35601 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rfc1P35601 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfc1P35601 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.13□□□□□ -0.15
Rfc1P35601 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfc1P35601 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.13□□□□□ -0.15
Rfc1P35601 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfc1P35601 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.13□□□□□ -0.15
Rfc1P35601 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfc1P35601 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rfc1P35601 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc1P35601 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfc1P35601 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc1P35601 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.12□□□□□ -0.15
Rfc1P35601 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfc1P35601 Gm11543-201ENSMUST00000120758 370 ntBASIC14.12□□□□□ -0.15
Rfc1P35601 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfc1P35601 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms