Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Gm13015-201ENSMUST00000118674 204 ntBASIC14.1□□□□□ -0.15
Usp4P35123 Gm6222-201ENSMUST00000120787 396 ntBASIC14.1□□□□□ -0.15
Usp4P35123 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp4P35123 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Gm28630-201ENSMUST00000187806 498 ntBASIC14.1□□□□□ -0.15
Usp4P35123 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp4P35123 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Mir497b-201ENSMUST00000093601 125 ntBASIC14.1□□□□□ -0.15
Usp4P35123 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.1□□□□□ -0.15
Usp4P35123 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp4P35123 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp4P35123 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp4P35123 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp4P35123 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp4P35123 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp4P35123 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp4P35123 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp4P35123 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.09□□□□□ -0.15
Usp4P35123 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp4P35123 Gm29541-201ENSMUST00000191351 678 ntBASIC14.09□□□□□ -0.15
Usp4P35123 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.09□□□□□ -0.15
Usp4P35123 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp4P35123 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp4P35123 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp4P35123 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp4P35123 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Usp4P35123 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp4P35123 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp4P35123 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Usp4P35123 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Usp4P35123 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp4P35123 Gm18766-201ENSMUST00000189811 808 ntBASIC14.08□□□□□ -0.16
Usp4P35123 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Gm45453-201ENSMUST00000211758 853 ntBASIC14.08□□□□□ -0.16
Usp4P35123 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp4P35123 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp4P35123 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp4P35123 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Usp4P35123 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp4P35123 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp4P35123 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.07□□□□□ -0.16
Usp4P35123 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Usp4P35123 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp4P35123 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms