Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm12882-201ENSMUST00000121696 517 ntBASIC11.56□□□□□ -0.56
Slc6a1P31648 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm5312-201ENSMUST00000203728 547 ntBASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.56□□□□□ -0.56
Slc6a1P31648 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Slc6a1P31648 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Rpph1-201ENSMUST00000175096 319 ntBASIC11.55□□□□□ -0.56
Slc6a1P31648 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.55□□□□□ -0.56
Slc6a1P31648 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.55□□□□□ -0.56
Slc6a1P31648 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Slc6a1P31648 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.55□□□□□ -0.56
Slc6a1P31648 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Slc6a1P31648 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.54□□□□□ -0.56
Slc6a1P31648 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Slc6a1P31648 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.54□□□□□ -0.56
Slc6a1P31648 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms