Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nckap1P28660 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nckap1P28660 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.37□□□□□ -0.27
Nckap1P28660 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nckap1P28660 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.37□□□□□ -0.27
Nckap1P28660 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
Nckap1P28660 Gm16177-201ENSMUST00000120728 718 ntBASIC13.37□□□□□ -0.27
Nckap1P28660 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.37□□□□□ -0.27
Nckap1P28660 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.37□□□□□ -0.27
Nckap1P28660 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.37□□□□□ -0.27
Nckap1P28660 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.37□□□□□ -0.27
Nckap1P28660 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nckap1P28660 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nckap1P28660 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm12203-201ENSMUST00000118235 598 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm12209-201ENSMUST00000120089 596 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.36□□□□□ -0.27
Nckap1P28660 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Nckap1P28660 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.36□□□□□ -0.27
Nckap1P28660 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.36□□□□□ -0.27
Nckap1P28660 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.36□□□□□ -0.27
Nckap1P28660 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nckap1P28660 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Nckap1P28660 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Nckap1P28660 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.35□□□□□ -0.27
Nckap1P28660 Gm27572-201ENSMUST00000183702 255 ntBASIC13.35□□□□□ -0.27
Nckap1P28660 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.35□□□□□ -0.27
Nckap1P28660 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Nckap1P28660 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.35□□□□□ -0.27
Nckap1P28660 Gm45331-201ENSMUST00000209868 554 ntBASIC13.35□□□□□ -0.27
Nckap1P28660 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.35□□□□□ -0.27
Nckap1P28660 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nckap1P28660 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
Nckap1P28660 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nckap1P28660 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.35□□□□□ -0.27
Nckap1P28660 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nckap1P28660 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nckap1P28660 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nckap1P28660 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nckap1P28660 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Nckap1P28660 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms