Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.68□□□□□ -0.06
Pde6bP23440 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6bP23440 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.67□□□□□ -0.06
Pde6bP23440 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Gm8584-201ENSMUST00000171982 758 ntBASIC14.67□□□□□ -0.06
Pde6bP23440 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.67□□□□□ -0.06
Pde6bP23440 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.67□□□□□ -0.06
Pde6bP23440 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.67□□□□□ -0.06
Pde6bP23440 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pde6bP23440 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.67□□□□□ -0.06
Pde6bP23440 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6bP23440 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Pde6bP23440 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pde6bP23440 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm5370-201ENSMUST00000187187 574 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm42790-201ENSMUST00000201268 969 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Itm2b-204ENSMUST00000228637 783 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.66□□□□□ -0.06
Pde6bP23440 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6bP23440 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6bP23440 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pde6bP23440 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6bP23440 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms