Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
BdnfP21237 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.91□□□□□ -0.34
BdnfP21237 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BdnfP21237 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.91□□□□□ -0.34
BdnfP21237 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Gm26308-201ENSMUST00000157768 69 ntBASIC12.91□□□□□ -0.34
BdnfP21237 Gm25948-201ENSMUST00000175334 112 ntBASIC12.91□□□□□ -0.34
BdnfP21237 Gm27533-201ENSMUST00000183800 152 ntBASIC12.91□□□□□ -0.34
BdnfP21237 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
BdnfP21237 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
BdnfP21237 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
BdnfP21237 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
BdnfP21237 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.91□□□□□ -0.34
BdnfP21237 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BdnfP21237 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
BdnfP21237 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Mir698-201ENSMUST00000102164 109 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Gm15460-201ENSMUST00000118147 391 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
BdnfP21237 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.9□□□□□ -0.34
BdnfP21237 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
BdnfP21237 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Gm38294-201ENSMUST00000192831 381 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.9□□□□□ -0.34
BdnfP21237 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
BdnfP21237 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
BdnfP21237 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
BdnfP21237 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BdnfP21237 Syt7-205ENSMUST00000224135 1557 ntBASIC12.9□□□□□ -0.35
BdnfP21237 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.9□□□□□ -0.35
BdnfP21237 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
BdnfP21237 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BdnfP21237 Gm14701-201ENSMUST00000117156 348 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
BdnfP21237 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.89□□□□□ -0.35
BdnfP21237 Gm37935-201ENSMUST00000192012 982 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.89□□□□□ -0.35
BdnfP21237 Gm46209-201ENSMUST00000217912 553 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms