Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gm12390-201ENSMUST00000117897 397 ntBASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gm25318-201ENSMUST00000122554 314 ntBASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfrsf9P20334 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Acot6-202ENSMUST00000222921 3622 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm13464-201ENSMUST00000119418 935 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm22923-201ENSMUST00000174952 110 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.1□□□□□ -0.63
Tnfrsf9P20334 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf9P20334 BC043934-202ENSMUST00000185694 2356 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms