Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.67□□□□□ -0.38
TP20293 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.67□□□□□ -0.38
TP20293 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.67□□□□□ -0.38
TP20293 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.67□□□□□ -0.38
TP20293 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.67□□□□□ -0.38
TP20293 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.67□□□□□ -0.38
TP20293 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TP20293 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.67□□□□□ -0.38
TP20293 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.67□□□□□ -0.38
TP20293 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.67□□□□□ -0.38
TP20293 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TP20293 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TP20293 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TP20293 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.66□□□□□ -0.38
TP20293 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TP20293 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.66□□□□□ -0.38
TP20293 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.66□□□□□ -0.38
TP20293 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Gm27772-201ENSMUST00000184900 187 ntBASIC12.66□□□□□ -0.38
TP20293 Gm28760-201ENSMUST00000185995 736 ntBASIC12.66□□□□□ -0.38
TP20293 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TP20293 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.66□□□□□ -0.38
TP20293 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TP20293 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.66□□□□□ -0.38
TP20293 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.66□□□□□ -0.38
TP20293 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TP20293 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TP20293 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TP20293 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.65□□□□□ -0.38
TP20293 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TP20293 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.65□□□□□ -0.38
TP20293 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.65□□□□□ -0.38
TP20293 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.65□□□□□ -0.38
TP20293 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TP20293 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
TP20293 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms