Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cntn1P12960 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cntn1P12960 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cntn1P12960 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.88□□□□□ -0.35
Cntn1P12960 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.88□□□□□ -0.35
Cntn1P12960 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Gm11425-201ENSMUST00000119608 498 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Gm6152-201ENSMUST00000151704 340 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.88□□□□□ -0.35
Cntn1P12960 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.88□□□□□ -0.35
Cntn1P12960 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.88□□□□□ -0.35
Cntn1P12960 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Gm9396-201ENSMUST00000076703 567 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Gm26315-201ENSMUST00000083890 321 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cntn1P12960 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cntn1P12960 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cntn1P12960 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.88□□□□□ -0.35
Cntn1P12960 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.88□□□□□ -0.35
Cntn1P12960 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cntn1P12960 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.87□□□□□ -0.35
Cntn1P12960 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cntn1P12960 Gm18062-201ENSMUST00000208020 547 ntBASIC12.87□□□□□ -0.35
Cntn1P12960 Gm18055-201ENSMUST00000208254 547 ntBASIC12.87□□□□□ -0.35
Cntn1P12960 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.87□□□□□ -0.35
Cntn1P12960 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cntn1P12960 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms