Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 Dctn4-202ENSMUST00000223590 1530 ntBASIC19.9■□□□□ 0.78
NclP09405 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NclP09405 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NclP09405 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC19.9■□□□□ 0.78
NclP09405 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.9■□□□□ 0.78
NclP09405 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NclP09405 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NclP09405 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NclP09405 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
NclP09405 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
NclP09405 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm4271-201ENSMUST00000174444 973 ntBASIC19.89■□□□□ 0.77
NclP09405 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NclP09405 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Gm38577-201ENSMUST00000221531 4545 ntBASIC19.89■□□□□ 0.77
NclP09405 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NclP09405 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NclP09405 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
NclP09405 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.88■□□□□ 0.77
NclP09405 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NclP09405 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC19.88■□□□□ 0.77
NclP09405 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NclP09405 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.88■□□□□ 0.77
NclP09405 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NclP09405 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC19.88■□□□□ 0.77
NclP09405 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NclP09405 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC19.88■□□□□ 0.77
NclP09405 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NclP09405 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
NclP09405 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NclP09405 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NclP09405 Gm5370-201ENSMUST00000187187 574 ntBASIC19.87■□□□□ 0.77
NclP09405 Gm42693-201ENSMUST00000196779 631 ntBASIC19.87■□□□□ 0.77
NclP09405 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC19.87■□□□□ 0.77
NclP09405 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.87■□□□□ 0.77
NclP09405 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NclP09405 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NclP09405 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NclP09405 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NclP09405 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC19.86■□□□□ 0.77
NclP09405 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Gm18630-201ENSMUST00000222109 1397 ntBASIC19.86■□□□□ 0.77
NclP09405 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NclP09405 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC19.86■□□□□ 0.77
NclP09405 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC19.86■□□□□ 0.77
NclP09405 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms