Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Spcs1-203ENSMUST00000226374 592 ntBASIC15.04■□□□□ -0
Polr2aP08775 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.03■□□□□ -0
Polr2aP08775 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.03■□□□□ -0
Polr2aP08775 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Gm13408-201ENSMUST00000119822 798 ntBASIC15.03■□□□□ -0
Polr2aP08775 Gm13935-201ENSMUST00000121859 798 ntBASIC15.03■□□□□ -0
Polr2aP08775 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.03■□□□□ -0
Polr2aP08775 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Polr2aP08775 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.03■□□□□ -0
Polr2aP08775 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.03■□□□□ -0
Polr2aP08775 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.03■□□□□ -0
Polr2aP08775 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.03■□□□□ -0
Polr2aP08775 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Polr2aP08775 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Polr2aP08775 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Polr2aP08775 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.02■□□□□ -0
Polr2aP08775 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.02■□□□□ -0
Polr2aP08775 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.02■□□□□ -0
Polr2aP08775 Gm44651-201ENSMUST00000207343 372 ntBASIC15.02■□□□□ -0
Polr2aP08775 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.02■□□□□ -0
Polr2aP08775 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.02■□□□□ -0
Polr2aP08775 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.02■□□□□ -0
Polr2aP08775 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.02■□□□□ -0
Polr2aP08775 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Polr2aP08775 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.02■□□□□ -0
Polr2aP08775 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Polr2aP08775 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Polr2aP08775 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Polr2aP08775 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Polr2aP08775 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Polr2aP08775 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Polr2aP08775 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Polr2aP08775 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Polr2aP08775 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.02□□□□□ -0.01
Polr2aP08775 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Polr2aP08775 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Polr2aP08775 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.01□□□□□ -0.01
Polr2aP08775 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Polr2aP08775 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Polr2aP08775 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Polr2aP08775 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.01□□□□□ -0.01
Polr2aP08775 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.01□□□□□ -0.01
Polr2aP08775 Gm45219-201ENSMUST00000205602 465 ntBASIC15.01□□□□□ -0.01
Polr2aP08775 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.01□□□□□ -0.01
Polr2aP08775 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Polr2aP08775 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.01□□□□□ -0.01
Polr2aP08775 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.01□□□□□ -0.01
Polr2aP08775 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Polr2aP08775 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Polr2aP08775 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Gm11628-201ENSMUST00000117568 171 ntBASIC15□□□□□ -0.01
Polr2aP08775 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15□□□□□ -0.01
Polr2aP08775 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15□□□□□ -0.01
Polr2aP08775 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15□□□□□ -0.01
Polr2aP08775 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15□□□□□ -0.01
Polr2aP08775 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Polr2aP08775 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Polr2aP08775 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Polr2aP08775 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms