Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm8927-201ENSMUST00000181978 981 ntBASIC12.71□□□□□ -0.37
ApoeP08226 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.71□□□□□ -0.37
ApoeP08226 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ApoeP08226 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm3222-201ENSMUST00000071282 990 ntBASIC12.71□□□□□ -0.37
ApoeP08226 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ApoeP08226 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ApoeP08226 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ApoeP08226 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ApoeP08226 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ApoeP08226 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
ApoeP08226 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.7□□□□□ -0.38
ApoeP08226 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Gm9824-201ENSMUST00000178707 561 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Gm18766-201ENSMUST00000189811 808 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Gm33320-201ENSMUST00000192232 530 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.7□□□□□ -0.38
ApoeP08226 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Gm16476-201ENSMUST00000221544 139 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Gm10819-201ENSMUST00000099988 561 ntBASIC12.7□□□□□ -0.38
ApoeP08226 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ApoeP08226 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ApoeP08226 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.69□□□□□ -0.38
ApoeP08226 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ApoeP08226 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.69□□□□□ -0.38
ApoeP08226 Gm13385-201ENSMUST00000121089 220 ntBASIC12.69□□□□□ -0.38
ApoeP08226 Mir7221-201ENSMUST00000184009 72 ntBASIC12.69□□□□□ -0.38
ApoeP08226 Gm21470-201ENSMUST00000187680 696 ntBASIC12.69□□□□□ -0.38
ApoeP08226 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.69□□□□□ -0.38
ApoeP08226 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.69□□□□□ -0.38
ApoeP08226 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
ApoeP08226 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.69□□□□□ -0.38
ApoeP08226 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ApoeP08226 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms