Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TnfP06804 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.21□□□□□ -0.13
TnfP06804 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TnfP06804 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Gm16202-201ENSMUST00000117532 544 ntBASIC14.21□□□□□ -0.13
TnfP06804 Gm1335-201ENSMUST00000121653 386 ntBASIC14.21□□□□□ -0.13
TnfP06804 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Mir1938-201ENSMUST00000158746 100 ntBASIC14.21□□□□□ -0.13
TnfP06804 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
TnfP06804 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.21□□□□□ -0.13
TnfP06804 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TnfP06804 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TnfP06804 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TnfP06804 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.2□□□□□ -0.14
TnfP06804 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TnfP06804 Gm17420-201ENSMUST00000164753 153 ntBASIC14.2□□□□□ -0.14
TnfP06804 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.2□□□□□ -0.14
TnfP06804 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.2□□□□□ -0.14
TnfP06804 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Gm10146-201ENSMUST00000072739 309 ntBASIC14.2□□□□□ -0.14
TnfP06804 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TnfP06804 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TnfP06804 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Gm13392-201ENSMUST00000117708 150 ntBASIC14.19□□□□□ -0.14
TnfP06804 Gm8805-201ENSMUST00000117848 313 ntBASIC14.19□□□□□ -0.14
TnfP06804 Gm13123-201ENSMUST00000122173 492 ntBASIC14.19□□□□□ -0.14
TnfP06804 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.19□□□□□ -0.14
TnfP06804 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 Gm27682-201ENSMUST00000183930 110 ntBASIC14.19□□□□□ -0.14
TnfP06804 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.19□□□□□ -0.14
TnfP06804 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.19□□□□□ -0.14
TnfP06804 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TnfP06804 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms