Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.85□□□□□ -0.19
PrnpP04925 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.85□□□□□ -0.19
PrnpP04925 Gm24548-201ENSMUST00000158650 108 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Gm16570-201ENSMUST00000161951 436 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Gm20482-202ENSMUST00000174729 825 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Gm18827-201ENSMUST00000188341 790 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.85□□□□□ -0.19
PrnpP04925 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PrnpP04925 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PrnpP04925 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PrnpP04925 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrnpP04925 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PrnpP04925 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.84□□□□□ -0.19
PrnpP04925 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PrnpP04925 Gm37042-201ENSMUST00000193816 581 ntBASIC13.84□□□□□ -0.19
PrnpP04925 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.84□□□□□ -0.19
PrnpP04925 Gm6458-201ENSMUST00000211573 635 ntBASIC13.84□□□□□ -0.19
PrnpP04925 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
PrnpP04925 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrnpP04925 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PrnpP04925 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PrnpP04925 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
PrnpP04925 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
PrnpP04925 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
PrnpP04925 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PrnpP04925 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PrnpP04925 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PrnpP04925 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PrnpP04925 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
PrnpP04925 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.83□□□□□ -0.2
PrnpP04925 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.83□□□□□ -0.2
PrnpP04925 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PrnpP04925 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.83□□□□□ -0.2
PrnpP04925 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.83□□□□□ -0.2
PrnpP04925 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Gm25668-201ENSMUST00000157700 129 ntBASIC13.83□□□□□ -0.2
PrnpP04925 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.83□□□□□ -0.2
PrnpP04925 Mir3102-201ENSMUST00000175555 104 ntBASIC13.83□□□□□ -0.2
PrnpP04925 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.83□□□□□ -0.2
PrnpP04925 Gm37466-201ENSMUST00000195692 652 ntBASIC13.83□□□□□ -0.2
PrnpP04925 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PrnpP04925 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.83□□□□□ -0.2
PrnpP04925 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrnpP04925 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms