Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04224 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04224 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P04224 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.78□□□□□ -0.52
P04224 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.78□□□□□ -0.52
P04224 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.78□□□□□ -0.52
P04224 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.78□□□□□ -0.52
P04224 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.78□□□□□ -0.52
P04224 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.78□□□□□ -0.52
P04224 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
P04224 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04224 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P04224 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
P04224 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
P04224 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P04224 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
P04224 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.77□□□□□ -0.52
P04224 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.77□□□□□ -0.53
P04224 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.77□□□□□ -0.53
P04224 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P04224 Gm44492-201ENSMUST00000197012 141 ntBASIC11.77□□□□□ -0.53
P04224 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P04224 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.77□□□□□ -0.53
P04224 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.77□□□□□ -0.53
P04224 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.77□□□□□ -0.53
P04224 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P04224 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P04224 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
P04224 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.77□□□□□ -0.53
P04224 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.77□□□□□ -0.53
P04224 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.77□□□□□ -0.53
P04224 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gm6973-201ENSMUST00000117080 721 ntBASIC11.76□□□□□ -0.53
P04224 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.76□□□□□ -0.53
P04224 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.76□□□□□ -0.53
P04224 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.76□□□□□ -0.53
P04224 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.76□□□□□ -0.53
P04224 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.76□□□□□ -0.53
P04224 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.76□□□□□ -0.53
P04224 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.76□□□□□ -0.53
P04224 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04224 Psmb5-202ENSMUST00000227257 622 ntBASIC11.76□□□□□ -0.53
P04224 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms