Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm44262-201ENSMUST00000204969 372 ntBASIC16.18■□□□□ 0.18
Col4a1P02463 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.18■□□□□ 0.18
Col4a1P02463 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.17■□□□□ 0.18
Col4a1P02463 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Gm12217-201ENSMUST00000118858 696 ntBASIC16.17■□□□□ 0.18
Col4a1P02463 Gm12291-201ENSMUST00000121627 311 ntBASIC16.17■□□□□ 0.18
Col4a1P02463 Gm24845-201ENSMUST00000158034 109 ntBASIC16.17■□□□□ 0.18
Col4a1P02463 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.17■□□□□ 0.18
Col4a1P02463 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.17■□□□□ 0.18
Col4a1P02463 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a1P02463 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.16■□□□□ 0.18
Col4a1P02463 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm16296-201ENSMUST00000159905 325 ntBASIC16.16■□□□□ 0.18
Col4a1P02463 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col4a1P02463 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col4a1P02463 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col4a1P02463 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a1P02463 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.15■□□□□ 0.18
Col4a1P02463 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col4a1P02463 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Col4a1P02463 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Gm7857-201ENSMUST00000117957 358 ntBASIC16.15■□□□□ 0.18
Col4a1P02463 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.15■□□□□ 0.18
Col4a1P02463 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Col4a1P02463 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.15■□□□□ 0.18
Col4a1P02463 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.15■□□□□ 0.18
Col4a1P02463 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.15■□□□□ 0.18
Col4a1P02463 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.15■□□□□ 0.18
Col4a1P02463 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Col4a1P02463 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Col4a1P02463 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col4a1P02463 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a1P02463 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms