Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Ifnb1P01575 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ifnb1P01575 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ifnb1P01575 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ifnb1P01575 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ifnb1P01575 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Mir7023-201ENSMUST00000185093 64 ntBASIC14.18□□□□□ -0.14
Ifnb1P01575 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ifnb1P01575 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ifnb1P01575 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Syt7-204ENSMUST00000223586 1344 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ifnb1P01575 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm15376-201ENSMUST00000122258 783 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.17□□□□□ -0.14
Ifnb1P01575 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm28760-201ENSMUST00000185995 736 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm43094-201ENSMUST00000196549 921 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm5161-201ENSMUST00000075243 853 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm24447-201ENSMUST00000083977 338 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ifnb1P01575 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ifnb1P01575 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.17□□□□□ -0.14
Ifnb1P01575 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.17□□□□□ -0.14
Ifnb1P01575 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ifnb1P01575 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ifnb1P01575 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ifnb1P01575 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ifnb1P01575 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ifnb1P01575 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ifnb1P01575 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ifnb1P01575 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms