Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ifna1P01572 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.32□□□□□ -0.6
Ifna1P01572 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.32□□□□□ -0.6
Ifna1P01572 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.32□□□□□ -0.6
Ifna1P01572 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ifna1P01572 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna1P01572 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ifna1P01572 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna1P01572 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna1P01572 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm33320-201ENSMUST00000192232 530 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.31□□□□□ -0.6
Ifna1P01572 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna1P01572 Dupd1-202ENSMUST00000224735 548 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.31□□□□□ -0.6
Ifna1P01572 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna1P01572 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Ifna1P01572 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna1P01572 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.3□□□□□ -0.6
Ifna1P01572 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ifna1P01572 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ifna1P01572 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna1P01572 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms