Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.44■□□□□ 0.38
Apaf1O88879 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.44■□□□□ 0.38
Apaf1O88879 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.44■□□□□ 0.38
Apaf1O88879 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Apaf1O88879 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Apaf1O88879 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.44■□□□□ 0.38
Apaf1O88879 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Apaf1O88879 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Apaf1O88879 Grk6-205ENSMUST00000224653 2976 ntBASIC17.43■□□□□ 0.38
Apaf1O88879 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Apaf1O88879 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Apaf1O88879 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.43■□□□□ 0.38
Apaf1O88879 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.43■□□□□ 0.38
Apaf1O88879 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Gm11425-201ENSMUST00000119608 498 ntBASIC17.43■□□□□ 0.38
Apaf1O88879 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.43■□□□□ 0.38
Apaf1O88879 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Apaf1O88879 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.43■□□□□ 0.38
Apaf1O88879 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Gm9396-201ENSMUST00000076703 567 ntBASIC17.43■□□□□ 0.38
Apaf1O88879 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Apaf1O88879 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Apaf1O88879 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Apaf1O88879 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Gm4984-201ENSMUST00000115987 360 ntBASIC17.42■□□□□ 0.38
Apaf1O88879 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.42■□□□□ 0.38
Apaf1O88879 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.42■□□□□ 0.38
Apaf1O88879 Mir7085-201ENSMUST00000184353 66 ntBASIC17.42■□□□□ 0.38
Apaf1O88879 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.42■□□□□ 0.38
Apaf1O88879 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Apaf1O88879 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.42■□□□□ 0.38
Apaf1O88879 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Apaf1O88879 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Apaf1O88879 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.41■□□□□ 0.38
Apaf1O88879 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apaf1O88879 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.41■□□□□ 0.38
Apaf1O88879 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms