Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Lmx1bO88609 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.18□□□□□ -0.46
Lmx1bO88609 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.18□□□□□ -0.46
Lmx1bO88609 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmx1bO88609 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmx1bO88609 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmx1bO88609 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.17□□□□□ -0.46
Lmx1bO88609 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm38223-201ENSMUST00000194484 695 ntBASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm38671-201ENSMUST00000200573 130 ntBASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm42550-201ENSMUST00000201553 960 ntBASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gm5161-201ENSMUST00000075243 853 ntBASIC12.17□□□□□ -0.46
Lmx1bO88609 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lmx1bO88609 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lmx1bO88609 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.17□□□□□ -0.46
Lmx1bO88609 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Gm15371-201ENSMUST00000117057 784 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Mir1982-201ENSMUST00000157368 74 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lmx1bO88609 Gm2445-201ENSMUST00000182798 989 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.16□□□□□ -0.46
Lmx1bO88609 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.16□□□□□ -0.46
Lmx1bO88609 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms