Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.39□□□□□ -0.43
Cops4O88544 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Gm6222-201ENSMUST00000120787 396 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Gm25911-201ENSMUST00000157621 56 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm18889-201ENSMUST00000174284 929 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cops4O88544 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Gm29310-201ENSMUST00000185468 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21825-201ENSMUST00000185728 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm29109-201ENSMUST00000185895 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21896-201ENSMUST00000186520 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21873-201ENSMUST00000186728 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21794-201ENSMUST00000187056 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21880-201ENSMUST00000187275 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21826-201ENSMUST00000187451 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21198-201ENSMUST00000188393 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21749-201ENSMUST00000189343 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21901-201ENSMUST00000189568 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm29424-201ENSMUST00000189716 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm28599-201ENSMUST00000189838 694 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21867-201ENSMUST00000189917 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm29269-201ENSMUST00000190087 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21722-201ENSMUST00000190153 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm28423-201ENSMUST00000190701 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21899-201ENSMUST00000190745 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21910-201ENSMUST00000191163 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21849-201ENSMUST00000191571 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm28678-201ENSMUST00000191593 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm20910-201ENSMUST00000193268 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Gm21871-201ENSMUST00000194621 696 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.39□□□□□ -0.43
Cops4O88544 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.39□□□□□ -0.43
Cops4O88544 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops4O88544 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.39□□□□□ -0.43
Cops4O88544 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cops4O88544 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.38□□□□□ -0.43
Cops4O88544 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.38□□□□□ -0.43
Cops4O88544 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.38□□□□□ -0.43
Cops4O88544 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cops4O88544 Gm18027-201ENSMUST00000218947 619 ntBASIC12.38□□□□□ -0.43
Cops4O88544 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.38□□□□□ -0.43
Cops4O88544 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cops4O88544 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.38□□□□□ -0.43
Cops4O88544 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cops4O88544 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cops4O88544 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cops4O88544 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms