Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nid2O88322 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.23■□□□□ 0.35
Nid2O88322 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.23■□□□□ 0.35
Nid2O88322 Daam2-202ENSMUST00000224595 1926 ntBASIC17.23■□□□□ 0.35
Nid2O88322 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nid2O88322 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nid2O88322 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nid2O88322 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nid2O88322 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Nid2O88322 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nid2O88322 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.22■□□□□ 0.35
Nid2O88322 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Gm45224-201ENSMUST00000208203 414 ntBASIC17.22■□□□□ 0.35
Nid2O88322 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.22■□□□□ 0.35
Nid2O88322 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.22■□□□□ 0.35
Nid2O88322 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Nid2O88322 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nid2O88322 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nid2O88322 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.21■□□□□ 0.35
Nid2O88322 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.21■□□□□ 0.35
Nid2O88322 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.21■□□□□ 0.35
Nid2O88322 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nid2O88322 Gm8546-201ENSMUST00000178288 1264 ntBASIC17.21■□□□□ 0.35
Nid2O88322 Gm38092-201ENSMUST00000195600 653 ntBASIC17.21■□□□□ 0.35
Nid2O88322 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.21■□□□□ 0.35
Nid2O88322 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.21■□□□□ 0.35
Nid2O88322 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nid2O88322 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Nid2O88322 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nid2O88322 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nid2O88322 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.21■□□□□ 0.34
Nid2O88322 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.21■□□□□ 0.34
Nid2O88322 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.21■□□□□ 0.34
Nid2O88322 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.21■□□□□ 0.34
Nid2O88322 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nid2O88322 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nid2O88322 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Crry-ps-201ENSMUST00000079090 1309 ntBASIC17.2■□□□□ 0.34
Nid2O88322 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.2■□□□□ 0.34
Nid2O88322 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nid2O88322 Gm13461-201ENSMUST00000120980 662 ntBASIC17.2■□□□□ 0.34
Nid2O88322 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nid2O88322 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.2■□□□□ 0.34
Nid2O88322 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.2■□□□□ 0.34
Nid2O88322 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.2■□□□□ 0.34
Nid2O88322 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Nid2O88322 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.2■□□□□ 0.34
Nid2O88322 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.2■□□□□ 0.34
Nid2O88322 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nid2O88322 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms