Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm23931-201ENSMUST00000103842 109 ntBASIC15.41■□□□□ 0.06
Copb2O55029 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Gm14350-201ENSMUST00000116642 640 ntBASIC15.41■□□□□ 0.06
Copb2O55029 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Copb2O55029 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.41■□□□□ 0.06
Copb2O55029 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.41■□□□□ 0.06
Copb2O55029 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.41■□□□□ 0.06
Copb2O55029 Gm17420-201ENSMUST00000164753 153 ntBASIC15.41■□□□□ 0.06
Copb2O55029 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.41■□□□□ 0.06
Copb2O55029 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.41■□□□□ 0.06
Copb2O55029 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Copb2O55029 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Copb2O55029 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Copb2O55029 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.41■□□□□ 0.06
Copb2O55029 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.41■□□□□ 0.06
Copb2O55029 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Copb2O55029 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Copb2O55029 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Copb2O55029 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.4■□□□□ 0.06
Copb2O55029 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Copb2O55029 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.4■□□□□ 0.06
Copb2O55029 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Gm42693-201ENSMUST00000196779 631 ntBASIC15.4■□□□□ 0.06
Copb2O55029 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Copb2O55029 Gm10478-201ENSMUST00000084451 396 ntBASIC15.4■□□□□ 0.06
Copb2O55029 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.4■□□□□ 0.06
Copb2O55029 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Copb2O55029 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Copb2O55029 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Copb2O55029 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.39■□□□□ 0.05
Copb2O55029 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
Copb2O55029 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.39■□□□□ 0.05
Copb2O55029 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.39■□□□□ 0.05
Copb2O55029 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Gm27572-201ENSMUST00000183702 255 ntBASIC15.39■□□□□ 0.05
Copb2O55029 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.39■□□□□ 0.05
Copb2O55029 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.39■□□□□ 0.05
Copb2O55029 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Copb2O55029 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Copb2O55029 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms