Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Banf1O54962 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Gm12585-201ENSMUST00000117307 290 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Gm15770-201ENSMUST00000117498 584 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Gm15678-201ENSMUST00000117573 960 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Gm15240-201ENSMUST00000118156 720 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Banf1O54962 Gm26308-201ENSMUST00000157768 69 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Gm6736-201ENSMUST00000166583 948 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Gm27321-201ENSMUST00000185021 205 ntBASIC13.67□□□□□ -0.22
Banf1O54962 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Banf1O54962 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.67□□□□□ -0.22
Banf1O54962 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Banf1O54962 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Banf1O54962 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Gm24420-201ENSMUST00000176676 59 ntBASIC13.66□□□□□ -0.22
Banf1O54962 Gm27680-201ENSMUST00000184192 160 ntBASIC13.66□□□□□ -0.22
Banf1O54962 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.66□□□□□ -0.22
Banf1O54962 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Banf1O54962 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Banf1O54962 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Gm4875-201ENSMUST00000118257 786 ntBASIC13.65□□□□□ -0.22
Banf1O54962 Gm3436-201ENSMUST00000179930 840 ntBASIC13.65□□□□□ -0.22
Banf1O54962 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.65□□□□□ -0.22
Banf1O54962 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Banf1O54962 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.65□□□□□ -0.22
Banf1O54962 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Banf1O54962 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Banf1O54962 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.65□□□□□ -0.22
Banf1O54962 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Banf1O54962 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Banf1O54962 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.23
Banf1O54962 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Banf1O54962 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Banf1O54962 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.64□□□□□ -0.23
Banf1O54962 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Banf1O54962 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Banf1O54962 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.64□□□□□ -0.23
Banf1O54962 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.64□□□□□ -0.23
Banf1O54962 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Banf1O54962 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms