Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.83□□□□□ -0.2
Sdc4O35988 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.83□□□□□ -0.2
Sdc4O35988 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sdc4O35988 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc4O35988 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sdc4O35988 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.83□□□□□ -0.2
Sdc4O35988 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.82□□□□□ -0.2
Sdc4O35988 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sdc4O35988 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.82□□□□□ -0.2
Sdc4O35988 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.82□□□□□ -0.2
Sdc4O35988 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.82□□□□□ -0.2
Sdc4O35988 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.82□□□□□ -0.2
Sdc4O35988 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sdc4O35988 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.82□□□□□ -0.2
Sdc4O35988 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc4O35988 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sdc4O35988 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.81□□□□□ -0.2
Sdc4O35988 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm40466-201ENSMUST00000212174 422 ntBASIC13.81□□□□□ -0.2
Sdc4O35988 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm9899-201ENSMUST00000065519 555 ntBASIC13.81□□□□□ -0.2
Sdc4O35988 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc4O35988 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc4O35988 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.81□□□□□ -0.2
Sdc4O35988 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sdc4O35988 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.8□□□□□ -0.2
Sdc4O35988 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms