Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Npc1O35604 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Npc1O35604 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Npc1O35604 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npc1O35604 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.11□□□□□ -0.31
Npc1O35604 Gm15678-201ENSMUST00000117573 960 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.11□□□□□ -0.31
Npc1O35604 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.11□□□□□ -0.31
Npc1O35604 Gm38144-201ENSMUST00000192790 465 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.11□□□□□ -0.31
Npc1O35604 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npc1O35604 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Gm5356-201ENSMUST00000093326 615 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.11□□□□□ -0.31
Npc1O35604 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npc1O35604 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.1□□□□□ -0.31
Npc1O35604 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Mir1894-201ENSMUST00000122802 81 ntBASIC13.1□□□□□ -0.31
Npc1O35604 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.1□□□□□ -0.31
Npc1O35604 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.1□□□□□ -0.31
Npc1O35604 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Npc1O35604 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Npc1O35604 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.1□□□□□ -0.31
Npc1O35604 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npc1O35604 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Npc1O35604 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npc1O35604 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms