Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm43575-201ENSMUST00000196420 516 ntBASIC10.63□□□□□ -0.71
Efnb3O35393 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Efnb3O35393 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.63□□□□□ -0.71
Efnb3O35393 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Efnb3O35393 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.62□□□□□ -0.71
Efnb3O35393 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Efnb3O35393 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Efnb3O35393 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Efnb3O35393 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Efnb3O35393 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.62□□□□□ -0.71
Efnb3O35393 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.62□□□□□ -0.71
Efnb3O35393 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.62□□□□□ -0.71
Efnb3O35393 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Efnb3O35393 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Efnb3O35393 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Efnb3O35393 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.61□□□□□ -0.71
Efnb3O35393 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Efnb3O35393 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Efnb3O35393 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Mir874-201ENSMUST00000104769 76 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Efnb3O35393 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm13365-201ENSMUST00000121188 973 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms