Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Shd-206ENSMUST00000225145 998 ntBASIC12□□□□□ -0.49
Alx4O35137 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12□□□□□ -0.49
Alx4O35137 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12□□□□□ -0.49
Alx4O35137 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12□□□□□ -0.49
Alx4O35137 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Alx4O35137 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12□□□□□ -0.49
Alx4O35137 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Alx4O35137 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Alx4O35137 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12□□□□□ -0.49
Alx4O35137 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.99□□□□□ -0.49
Alx4O35137 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.99□□□□□ -0.49
Alx4O35137 Gm27525-201ENSMUST00000184465 107 ntBASIC11.99□□□□□ -0.49
Alx4O35137 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.99□□□□□ -0.49
Alx4O35137 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Alx4O35137 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.99□□□□□ -0.49
Alx4O35137 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Alx4O35137 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Alx4O35137 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Alx4O35137 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Alx4O35137 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Alx4O35137 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Alx4O35137 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.98□□□□□ -0.49
Alx4O35137 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Gm15693-201ENSMUST00000120470 637 ntBASIC11.98□□□□□ -0.49
Alx4O35137 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
Alx4O35137 Gm25911-201ENSMUST00000157621 56 ntBASIC11.98□□□□□ -0.49
Alx4O35137 Gm24158-201ENSMUST00000175263 71 ntBASIC11.98□□□□□ -0.49
Alx4O35137 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Alx4O35137 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Alx4O35137 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.98□□□□□ -0.49
Alx4O35137 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Alx4O35137 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Alx4O35137 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms