Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm11814-201ENSMUST00000119515 929 ntBASIC15.7■□□□□ 0.1
Tcof1O08784 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.7■□□□□ 0.1
Tcof1O08784 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Tcof1O08784 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tcof1O08784 Gm24196-201ENSMUST00000179161 110 ntBASIC15.7■□□□□ 0.1
Tcof1O08784 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.7■□□□□ 0.1
Tcof1O08784 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.7■□□□□ 0.1
Tcof1O08784 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.7■□□□□ 0.1
Tcof1O08784 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tcof1O08784 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tcof1O08784 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tcof1O08784 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.7■□□□□ 0.1
Tcof1O08784 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcof1O08784 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.69■□□□□ 0.1
Tcof1O08784 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.69■□□□□ 0.1
Tcof1O08784 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.69■□□□□ 0.1
Tcof1O08784 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.69■□□□□ 0.1
Tcof1O08784 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.69■□□□□ 0.1
Tcof1O08784 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Itm2b-204ENSMUST00000228637 783 ntBASIC15.69■□□□□ 0.1
Tcof1O08784 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tcof1O08784 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.69■□□□□ 0.1
Tcof1O08784 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Tcof1O08784 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tcof1O08784 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tcof1O08784 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcof1O08784 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.68■□□□□ 0.1
Tcof1O08784 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.68■□□□□ 0.1
Tcof1O08784 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Gm27486-201ENSMUST00000184923 80 ntBASIC15.68■□□□□ 0.1
Tcof1O08784 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tcof1O08784 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.68■□□□□ 0.1
Tcof1O08784 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcof1O08784 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms