Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Gm3222-201ENSMUST00000071282 990 ntBASIC14.45□□□□□ -0.1
Usp35M0QWN7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Usp35M0QWN7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.44□□□□□ -0.1
Usp35M0QWN7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp35M0QWN7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Gm43630-201ENSMUST00000201550 776 ntBASIC14.43□□□□□ -0.1
Usp35M0QWN7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.43□□□□□ -0.1
Usp35M0QWN7 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.43□□□□□ -0.1
Usp35M0QWN7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.43□□□□□ -0.1
Usp35M0QWN7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp35M0QWN7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp35M0QWN7 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms