Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gm11478-201ENSMUST00000117851 599 ntBASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.26□□□□□ -0.77
Gm10553J3QPF1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.26□□□□□ -0.77
Gm10553J3QPF1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10553J3QPF1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm15371-201ENSMUST00000117057 784 ntBASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm2495-201ENSMUST00000191160 466 ntBASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm6983-201ENSMUST00000214912 628 ntBASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10553J3QPF1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Gm10553J3QPF1 Gm12928-201ENSMUST00000117115 573 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms