Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm12390-201ENSMUST00000117897 397 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm11803-201ENSMUST00000119966 444 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm10156-201ENSMUST00000122364 462 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Proscos-202ENSMUST00000178990 666 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm6091-201ENSMUST00000098307 165 ntBASIC13.37□□□□□ -0.27
Gm3139J3QK78 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm25857-201ENSMUST00000082788 129 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.36□□□□□ -0.27
Gm3139J3QK78 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3139J3QK78 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm6447-201ENSMUST00000118905 835 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm24644-201ENSMUST00000157114 139 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm22331-201ENSMUST00000158066 136 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm8810-201ENSMUST00000172895 754 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.35□□□□□ -0.27
Gm3139J3QK78 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm3139J3QK78 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms