Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm4875-201ENSMUST00000118257 786 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm27306-201ENSMUST00000183970 107 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh9F8VPK8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Gm17330-201ENSMUST00000221047 165 ntBASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh9F8VPK8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh9F8VPK8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh9F8VPK8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh9F8VPK8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh9F8VPK8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh9F8VPK8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh9F8VPK8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh9F8VPK8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh9F8VPK8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh9F8VPK8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms