Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm27514-201ENSMUST00000183692 110 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm16372-201ENSMUST00000073088 450 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Srp54bE9PXC0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Gm23931-201ENSMUST00000103842 109 ntBASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Gm1335-201ENSMUST00000121653 386 ntBASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srp54bE9PXC0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm13369-201ENSMUST00000119442 987 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Gm37922-201ENSMUST00000195596 455 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Srp54bE9PXC0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms