Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hfm1D3Z4R1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Gm24845-201ENSMUST00000158034 109 ntBASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Rprl1-202ENSMUST00000198476 238 ntBASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC18.52■□□□□ 0.56
Hfm1D3Z4R1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Hfm1D3Z4R1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC18.52■□□□□ 0.55
Hfm1D3Z4R1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hfm1D3Z4R1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm13296-201ENSMUST00000117854 997 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm6335-201ENSMUST00000118081 1194 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm7816-201ENSMUST00000119884 1194 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm15542-201ENSMUST00000121585 1194 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm9550-201ENSMUST00000161130 862 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm23363-201ENSMUST00000175024 79 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gm5051-201ENSMUST00000204085 485 ntBASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hfm1D3Z4R1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hfm1D3Z4R1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Gm17040-202ENSMUST00000170597 889 ntBASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hfm1D3Z4R1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms