Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tmf1B9EKI3 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.14■□□□□ 0.5
Tmf1B9EKI3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tmf1B9EKI3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC18.14■□□□□ 0.49
Tmf1B9EKI3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gm44069-201ENSMUST00000204898 506 ntBASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmf1B9EKI3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.14■□□□□ 0.49
Tmf1B9EKI3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm24644-201ENSMUST00000157114 139 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm29127-201ENSMUST00000188304 517 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm16372-201ENSMUST00000073088 450 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmf1B9EKI3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Gm12957-201ENSMUST00000117835 377 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Gm22331-201ENSMUST00000158066 136 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Gm29649-201ENSMUST00000185649 419 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmf1B9EKI3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Tmf1B9EKI3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms