Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a4A2AX52 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.32□□□□□ -0.6
Col6a4A2AX52 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm13123-201ENSMUST00000122173 492 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm14263-201ENSMUST00000117955 746 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm37489-201ENSMUST00000191883 159 ntBASIC11.31□□□□□ -0.6
Col6a4A2AX52 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col6a4A2AX52 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Gm29608-201ENSMUST00000190444 463 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Nsd1-205ENSMUST00000224693 852 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.3□□□□□ -0.6
Col6a4A2AX52 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a4A2AX52 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms