Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Mir874-201ENSMUST00000104769 76 ntBASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm27772-201ENSMUST00000184900 187 ntBASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm38294-201ENSMUST00000192831 381 ntBASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm18905-201ENSMUST00000205454 928 ntBASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc194A0A140LIT1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc194A0A140LIT1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms